- All India Institute of Hygiene and Public Health
- Cancer Institute (WIA)
- Central Institute of Medicinal and Aromatic Plants
- Chittaranjan National Cancer Institute
- Dr. B C Roy Post Graduate Institute of Paediatric Sciences
- Haffkine Institute
- Homi Bhabha Cancer Hospital and Research Centre, Visakhapatnam
- Indian Veterinary Research Institute
- Institute for Communicative and Cognitive Neurosciences
- Institute of Genetics and Hospital for Genetic Diseases
- Institute of Mental Health and Neurosciences
- Institute of Nuclear Medicine & Allied Sciences
- Institute of Palliative Medicine (Kozhikode)
- IPGMER and SSKM Hospital
- Jawaharlal Institute of Postgraduate Medical Education and Research
- Madras Diabetes Research Foundation
- Malabar Cancer Centre, Thalassery
- National Centre for Disease Control
- National Institute for Research in Bacterial Infections
- National Institute for Research in Reproductive Health
- National Institute for Research in Tuberculosis
- National Institute of Biomedical Genomics
- National Institute of Epidemiology
- National Institute of Immunology, India
- National Institute of Malaria Research
- National Institute of Mental Health and Neurosciences
- National Institute of Virology
- National Research Institute for Panchakarma
- National Tuberculosis Institute
- Neurobiology Research Centre
- OrthoCAD Network Research Cell
- Punjab Institute of Medical Sciences
- Rajiv Gandhi Centre for Biotechnology
- Regional Cancer Centre, Thiruvananthapuram
- Regional Medical Research Center, Bhubaneswar
- Regional Medical Research Centre, Dibrugarh
- Sir Ronald Ross Institute of Parasitology
- Sree Chitra Tirunal Institute for Medical Sciences and Technology, Trivandrum
- Swami Vivekanand National Institute of Rehabilitation Training and Research
- Tata Medical Center
- Tata Memorial Centre